gmxsasa[-f[.xtc/.trr/...]][-s[.tpr/.tpb/...]][-n[.ndx]]
可达总帧数的两倍大!
]traj.xtc输入轨迹: xtc trr cpt trj gro g96 pdb tng-s [.tpr/.tpb/…
gmxrotmat[-f[.xtc/.trr/...]][-s[.tpr/.tpb/...]][-n[.ndx]]
gmxrotacf[-f[.xtc/.trr/...]][-s[.tpr/.tpb/...]][-n[.ndx]]
gmxrmsf[-f[.xtc/.trr/...]][-s[.tpr/.tpb/...]][-n[.ndx]]
gmxrmsdist[-f[.xtc/.trr/...]][-s[.tpr/.tpb/...]][-n[.ndx]]
[-f2[.xtc/.trr/...]][-n[.ndx]][-o[.xvg]][-mir[.xvg]]
gmxrdf[-f[.xtc/.trr/...]][-s[.tpr/.tpb/...]][-n[.ndx]]
gmxrama[-f[.xtc/.trr/...]][-s[.tpr/.tpb/...]][-o[.xvg]]
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